Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Pkd1O08852 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Pkd1O08852 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pkd1O08852 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Pkd1O08852 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.19□□□□□ -0.78
Pkd1O08852 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.19□□□□□ -0.78
Pkd1O08852 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Pkd1O08852 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
Pkd1O08852 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gm8344-201ENSMUST00000119813 856 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.19□□□□□ -0.78
Pkd1O08852 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Pkd1O08852 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Pkd1O08852 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Pkd1O08852 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.19□□□□□ -0.78
Pkd1O08852 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.18□□□□□ -0.78
Pkd1O08852 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm6912-201ENSMUST00000117218 544 ntBASIC10.18□□□□□ -0.78
Pkd1O08852 Gm9385-201ENSMUST00000117563 472 ntBASIC10.18□□□□□ -0.78
Pkd1O08852 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.18□□□□□ -0.78
Pkd1O08852 Gm10253-201ENSMUST00000194270 940 ntBASIC10.18□□□□□ -0.78
Pkd1O08852 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC10.18□□□□□ -0.78
Pkd1O08852 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pkd1O08852 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.18□□□□□ -0.78
Pkd1O08852 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.18□□□□□ -0.78
Pkd1O08852 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Pkd1O08852 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Pkd1O08852 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Thap2-203ENSMUST00000218989 527 ntBASIC10.17□□□□□ -0.78
Pkd1O08852 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.17□□□□□ -0.78
Pkd1O08852 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms