Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.67■□□□□ 0.26
Trove2O08848 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trove2O08848 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trove2O08848 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trove2O08848 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.66■□□□□ 0.26
Trove2O08848 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trove2O08848 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.66■□□□□ 0.26
Trove2O08848 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Trove2O08848 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trove2O08848 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
Trove2O08848 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trove2O08848 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trove2O08848 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trove2O08848 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Trove2O08848 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.65■□□□□ 0.26
Trove2O08848 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.65■□□□□ 0.26
Trove2O08848 Gm37025-201ENSMUST00000195159 829 ntBASIC16.65■□□□□ 0.26
Trove2O08848 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trove2O08848 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.64■□□□□ 0.25
Trove2O08848 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.64■□□□□ 0.25
Trove2O08848 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trove2O08848 Gm12085-201ENSMUST00000119263 940 ntBASIC16.64■□□□□ 0.25
Trove2O08848 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trove2O08848 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.64■□□□□ 0.25
Trove2O08848 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.64■□□□□ 0.25
Trove2O08848 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trove2O08848 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trove2O08848 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trove2O08848 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.63■□□□□ 0.25
Trove2O08848 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trove2O08848 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms