Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc2O08811 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc2O08811 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ercc2O08811 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.61■□□□□ 0.25
Ercc2O08811 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc2O08811 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ercc2O08811 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.6■□□□□ 0.25
Ercc2O08811 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ercc2O08811 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.6■□□□□ 0.25
Ercc2O08811 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.6■□□□□ 0.25
Ercc2O08811 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ercc2O08811 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc2O08811 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ercc2O08811 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ercc2O08811 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ercc2O08811 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.59■□□□□ 0.25
Ercc2O08811 Gm33142-201ENSMUST00000193913 867 ntBASIC16.59■□□□□ 0.25
Ercc2O08811 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ercc2O08811 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc2O08811 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ercc2O08811 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.58■□□□□ 0.25
Ercc2O08811 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Ercc2O08811 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ercc2O08811 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ercc2O08811 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Ercc2O08811 Gm27704-201ENSMUST00000185094 107 ntBASIC16.58■□□□□ 0.24
Ercc2O08811 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.58■□□□□ 0.24
Ercc2O08811 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ercc2O08811 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ercc2O08811 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.58■□□□□ 0.24
Ercc2O08811 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ercc2O08811 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ercc2O08811 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ercc2O08811 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.57■□□□□ 0.24
Ercc2O08811 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ercc2O08811 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.56■□□□□ 0.24
Ercc2O08811 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms