Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
Ebf3O08791 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.79■□□□□ 0.28
Ebf3O08791 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.79■□□□□ 0.28
Ebf3O08791 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.79■□□□□ 0.28
Ebf3O08791 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ebf3O08791 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ebf3O08791 Gm6296-201ENSMUST00000222599 943 ntBASIC16.79■□□□□ 0.28
Ebf3O08791 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ebf3O08791 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ebf3O08791 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.79■□□□□ 0.28
Ebf3O08791 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ebf3O08791 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Ebf3O08791 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.78■□□□□ 0.28
Ebf3O08791 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Ebf3O08791 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.78■□□□□ 0.28
Ebf3O08791 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ebf3O08791 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.78■□□□□ 0.28
Ebf3O08791 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ebf3O08791 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ebf3O08791 Gm13216-201ENSMUST00000117145 591 ntBASIC16.77■□□□□ 0.28
Ebf3O08791 Gm7862-201ENSMUST00000121461 292 ntBASIC16.77■□□□□ 0.28
Ebf3O08791 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.77■□□□□ 0.28
Ebf3O08791 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.77■□□□□ 0.28
Ebf3O08791 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.77■□□□□ 0.27
Ebf3O08791 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf3O08791 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf3O08791 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf3O08791 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.77■□□□□ 0.27
Ebf3O08791 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ebf3O08791 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ebf3O08791 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Ebf3O08791 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.76■□□□□ 0.27
Ebf3O08791 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Gm27525-201ENSMUST00000184465 107 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44357-201ENSMUST00000195897 142 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm19658-201ENSMUST00000196231 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44367-201ENSMUST00000196836 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44350-201ENSMUST00000197197 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44390-201ENSMUST00000197533 144 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44313-201ENSMUST00000198018 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44486-201ENSMUST00000198508 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44314-201ENSMUST00000199263 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44394-201ENSMUST00000199558 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44484-201ENSMUST00000199873 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44466-201ENSMUST00000200264 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 Gm44359-201ENSMUST00000200671 138 ntBASIC16.76■□□□□ 0.27
Ebf3O08791 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms