Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.56■□□□□ 0.4
Ube3aO08759 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3aO08759 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3aO08759 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3aO08759 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ube3aO08759 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ube3aO08759 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ube3aO08759 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.55■□□□□ 0.4
Ube3aO08759 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube3aO08759 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.55■□□□□ 0.4
Ube3aO08759 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube3aO08759 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.55■□□□□ 0.4
Ube3aO08759 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ube3aO08759 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.55■□□□□ 0.4
Ube3aO08759 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ube3aO08759 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.54■□□□□ 0.4
Ube3aO08759 Gm7791-201ENSMUST00000219066 539 ntBASIC17.54■□□□□ 0.4
Ube3aO08759 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ube3aO08759 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.54■□□□□ 0.4
Ube3aO08759 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.54■□□□□ 0.4
Ube3aO08759 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ube3aO08759 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.53■□□□□ 0.4
Ube3aO08759 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ube3aO08759 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ube3aO08759 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ube3aO08759 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ube3aO08759 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Ube3aO08759 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.52■□□□□ 0.4
Ube3aO08759 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.52■□□□□ 0.4
Ube3aO08759 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.52■□□□□ 0.4
Ube3aO08759 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.52■□□□□ 0.4
Ube3aO08759 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ube3aO08759 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ube3aO08759 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ube3aO08759 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ube3aO08759 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ube3aO08759 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ube3aO08759 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3aO08759 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3aO08759 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms