Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfrsf11bO08712 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfrsf11bO08712 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tnfrsf11bO08712 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf11bO08712 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf11bO08712 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf11bO08712 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf11bO08712 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf11bO08712 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms