Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NpcdF8VQB8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 AA543401-201ENSMUST00000164248 1269 ntBASIC19.43■□□□□ 0.7
NpcdF8VQB8 Gm17271-201ENSMUST00000165535 355 ntBASIC19.43■□□□□ 0.7
NpcdF8VQB8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NpcdF8VQB8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NpcdF8VQB8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.41■□□□□ 0.7
NpcdF8VQB8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.41■□□□□ 0.7
NpcdF8VQB8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NpcdF8VQB8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.4■□□□□ 0.7
NpcdF8VQB8 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.4■□□□□ 0.7
NpcdF8VQB8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Gm13616-201ENSMUST00000120600 222 ntBASIC19.4■□□□□ 0.7
NpcdF8VQB8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.4■□□□□ 0.7
NpcdF8VQB8 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.4■□□□□ 0.7
NpcdF8VQB8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NpcdF8VQB8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NpcdF8VQB8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NpcdF8VQB8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
NpcdF8VQB8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.39■□□□□ 0.69
NpcdF8VQB8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NpcdF8VQB8 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.39■□□□□ 0.69
NpcdF8VQB8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NpcdF8VQB8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NpcdF8VQB8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms