Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.67■□□□□ 0.26
Atf6F6VAN0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.66■□□□□ 0.26
Atf6F6VAN0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.66■□□□□ 0.26
Atf6F6VAN0 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.66■□□□□ 0.26
Atf6F6VAN0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Gm36967-201ENSMUST00000193814 266 ntBASIC16.66■□□□□ 0.26
Atf6F6VAN0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atf6F6VAN0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.65■□□□□ 0.26
Atf6F6VAN0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atf6F6VAN0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Atf6F6VAN0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Atf6F6VAN0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.64■□□□□ 0.25
Atf6F6VAN0 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.64■□□□□ 0.25
Atf6F6VAN0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.64■□□□□ 0.25
Atf6F6VAN0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atf6F6VAN0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms