Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm12176-201ENSMUST00000121420 875 ntBASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm24694-201ENSMUST00000180054 110 ntBASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm27663-201ENSMUST00000184839 110 ntBASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col6a3E9PWQ3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Gm12859-201ENSMUST00000117834 427 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Gm9063-201ENSMUST00000223299 582 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Syt7-204ENSMUST00000223586 1344 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Gm45668-201ENSMUST00000211271 493 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.14■□□□□ 0.17
Col6a3E9PWQ3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Gm15198-201ENSMUST00000117283 177 ntBASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.13■□□□□ 0.17
Col6a3E9PWQ3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Gm38241-201ENSMUST00000192641 898 ntBASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col6a3E9PWQ3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Gm43179-201ENSMUST00000198797 275 ntBASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Gm27680-201ENSMUST00000184192 160 ntBASIC16.11■□□□□ 0.17
Col6a3E9PWQ3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms