Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gm18889-201ENSMUST00000174284 929 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Mir6404-201ENSMUST00000183699 94 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gm43125-201ENSMUST00000201724 730 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Slc4a9E9PUP3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Gm5177-201ENSMUST00000183092 997 ntBASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Gm36967-201ENSMUST00000193814 266 ntBASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc4a9E9PUP3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Gm14127-201ENSMUST00000117906 678 ntBASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Rprl2-201ENSMUST00000157150 290 ntBASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc4a9E9PUP3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Gm13823-201ENSMUST00000119930 345 ntBASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc4a9E9PUP3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc4a9E9PUP3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc4a9E9PUP3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc4a9E9PUP3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc4a9E9PUP3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms