Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Gm13436-201ENSMUST00000120418 567 ntBASIC12.19□□□□□ -0.46
Gm5878E9PUB3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.19□□□□□ -0.46
Gm5878E9PUB3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Gm10566-201ENSMUST00000086739 996 ntBASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm5878E9PUB3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Gm5878E9PUB3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gm13559-201ENSMUST00000120476 863 ntBASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gm37055-201ENSMUST00000191866 133 ntBASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms