Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h2abC0HKE1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Hist1h2abC0HKE1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.86□□□□□ -0.03
Hist1h2abC0HKE1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist1h2abC0HKE1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.86□□□□□ -0.03
Hist1h2abC0HKE1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist1h2abC0HKE1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist1h2abC0HKE1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h2abC0HKE1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h2abC0HKE1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist1h2abC0HKE1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hist1h2abC0HKE1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Gm18959-201ENSMUST00000208954 655 ntBASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms