Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.63■□□□□ 0.57
Syce3B5KM66 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.63■□□□□ 0.57
Syce3B5KM66 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.63■□□□□ 0.57
Syce3B5KM66 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.62■□□□□ 0.57
Syce3B5KM66 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.62■□□□□ 0.57
Syce3B5KM66 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Syce3B5KM66 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.61■□□□□ 0.57
Syce3B5KM66 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Syce3B5KM66 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Syce3B5KM66 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Gm18958-201ENSMUST00000174258 762 ntBASIC18.6■□□□□ 0.57
Syce3B5KM66 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.6■□□□□ 0.57
Syce3B5KM66 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Syce3B5KM66 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syce3B5KM66 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Syce3B5KM66 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Syce3B5KM66 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.59■□□□□ 0.57
Syce3B5KM66 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Syce3B5KM66 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.59■□□□□ 0.57
Syce3B5KM66 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.59■□□□□ 0.57
Syce3B5KM66 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.59■□□□□ 0.57
Syce3B5KM66 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syce3B5KM66 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Syce3B5KM66 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Syce3B5KM66 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Syce3B5KM66 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syce3B5KM66 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syce3B5KM66 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syce3B5KM66 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syce3B5KM66 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Syce3B5KM66 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms