Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn2B2RVW2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn2B2RVW2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn2B2RVW2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn2B2RVW2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clrn2B2RVW2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Mir6404-201ENSMUST00000183699 94 ntBASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clrn2B2RVW2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clrn2B2RVW2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Clrn2B2RVW2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gm5682-201ENSMUST00000173402 505 ntBASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gm10175-201ENSMUST00000086013 645 ntBASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clrn2B2RVW2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clrn2B2RVW2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.68■□□□□ 0.58
Clrn2B2RVW2 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms