Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrn3B2RS91 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrn3B2RS91 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrn3B2RS91 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.28■□□□□ 0.2
Rrn3B2RS91 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Gm27357-201ENSMUST00000183754 135 ntBASIC16.28■□□□□ 0.2
Rrn3B2RS91 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Gm44430-201ENSMUST00000203376 995 ntBASIC16.28■□□□□ 0.2
Rrn3B2RS91 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrn3B2RS91 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.27■□□□□ 0.2
Rrn3B2RS91 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrn3B2RS91 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms