Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Gm7862-201ENSMUST00000121461 292 ntBASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d4bA6X942 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d4bA6X942 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh2d4bA6X942 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Gm11594-201ENSMUST00000122313 162 ntBASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Mir5131-201ENSMUST00000175426 93 ntBASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Gm27000-201ENSMUST00000182943 842 ntBASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d4bA6X942 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms