Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.12□□□□□ -0.31
Chd6A3KFM7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.12□□□□□ -0.31
Chd6A3KFM7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Gm17150-201ENSMUST00000165577 381 ntBASIC13.12□□□□□ -0.31
Chd6A3KFM7 Mir7684-201ENSMUST00000183858 60 ntBASIC13.12□□□□□ -0.31
Chd6A3KFM7 Gm37153-201ENSMUST00000193637 231 ntBASIC13.12□□□□□ -0.31
Chd6A3KFM7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd6A3KFM7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Chd6A3KFM7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Gm26461-201ENSMUST00000175064 290 ntBASIC13.11□□□□□ -0.31
Chd6A3KFM7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 Gm24158-201ENSMUST00000175263 71 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.1□□□□□ -0.31
Chd6A3KFM7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Chd6A3KFM7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Syt7-205ENSMUST00000224135 1557 ntBASIC13.09□□□□□ -0.31
Chd6A3KFM7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms