Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lnp1A0A1B0GSK3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm11355-201ENSMUST00000121120 306 ntBASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.51□□□□□ -0.25
Lnp1A0A1B0GSK3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Lnp1A0A1B0GSK3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm13836-201ENSMUST00000121159 501 ntBASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lnp1A0A1B0GSK3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms