Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm8587-201ENSMUST00000076538 843 ntBASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv17A0A140T8P8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv17A0A140T8P8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Gm10013-201ENSMUST00000106074 672 ntBASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Gm18115-201ENSMUST00000221209 621 ntBASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv17A0A140T8P8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms