Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-9A0A140T8P4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm13436-201ENSMUST00000120418 567 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Mir5130-201ENSMUST00000175160 84 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm7370-201ENSMUST00000219471 767 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Phf7-203ENSMUST00000226565 1971 ntBASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Igkv3-9A0A140T8P4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Igkv3-9A0A140T8P4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms