Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igkv3-5A0A140T8M6 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igkv3-5A0A140T8M6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.21□□□□□ -0.78
Igkv3-5A0A140T8M6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igkv3-5A0A140T8M6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm10653-202ENSMUST00000139570 835 ntBASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm27000-201ENSMUST00000182943 842 ntBASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igkv3-5A0A140T8M6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm8520-201ENSMUST00000186517 868 ntBASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm28265-201ENSMUST00000188201 2319 ntBASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Igkv3-5A0A140T8M6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv3-5A0A140T8M6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms