Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap99A0A140LIX9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Rps4l-201ENSMUST00000071745 943 ntBASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap99A0A140LIX9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Cfap99A0A140LIX9 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Gm44450-201ENSMUST00000199528 114 ntBASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap99A0A140LIX9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap99A0A140LIX9 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Gm18421-201ENSMUST00000204122 625 ntBASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Gm18206-201ENSMUST00000207027 926 ntBASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap99A0A140LIX9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cfap99A0A140LIX9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms