Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc194A0A140LIT1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Gm44450-201ENSMUST00000199528 114 ntBASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc194A0A140LIT1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Gm18421-201ENSMUST00000204122 625 ntBASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccdc194A0A140LIT1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc194A0A140LIT1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Gm11336-201ENSMUST00000118168 334 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.12■□□□□ 0.17
Ccdc194A0A140LIT1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms