Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 AC127302.2-201ENSMUST00000215212 268 ntBASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC33.76■■■■□ 3
Gm35339A0A140LHH9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC33.76■■■□□ 2.99
Gm35339A0A140LHH9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
Gm35339A0A140LHH9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Gm11424-201ENSMUST00000121929 829 ntBASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 AC131710.1-201ENSMUST00000228336 990 ntBASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC33.75■■■□□ 2.99
Gm35339A0A140LHH9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC33.74■■■□□ 2.99
Gm35339A0A140LHH9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Gm35339A0A140LHH9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Gm5745-201ENSMUST00000183748 313 ntBASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
Gm35339A0A140LHH9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 AC125206.2-201ENSMUST00000217454 574 ntBASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Gm27437-201ENSMUST00000183429 107 ntBASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Gm35339A0A140LHH9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
Gm35339A0A140LHH9 AC166341.4-201ENSMUST00000220625 123 ntBASIC33.7■■■□□ 2.99
Gm35339A0A140LHH9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Gm35339A0A140LHH9 AC124732.2-201ENSMUST00000221977 316 ntBASIC33.7■■■□□ 2.99
Gm35339A0A140LHH9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
Gm35339A0A140LHH9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
Gm35339A0A140LHH9 Gm9385-201ENSMUST00000117563 472 ntBASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 H2-Pa-201ENSMUST00000182803 626 ntBASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm35339A0A140LHH9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Gm5866-201ENSMUST00000177881 973 ntBASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
Gm35339A0A140LHH9 Gm6018-201ENSMUST00000216090 1306 ntBASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Gm5953-201ENSMUST00000220644 2616 ntBASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Gm35339A0A140LHH9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Gm35339A0A140LHH9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC33.66■■■□□ 2.98
Gm35339A0A140LHH9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms