Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13n-4A0A0G2JG01 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm17807-201ENSMUST00000186869 298 ntBASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13n-4A0A0G2JG01 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm17808-201ENSMUST00000200859 894 ntBASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13n-4A0A0G2JG01 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm17971-201ENSMUST00000190239 806 ntBASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm29518-201ENSMUST00000190858 372 ntBASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms