Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Igkv8-28A0A0G2JE47 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm7290-201ENSMUST00000104990 617 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm12918-201ENSMUST00000120234 636 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm15710-201ENSMUST00000121821 636 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm29241-201ENSMUST00000189260 1096 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm5075-201ENSMUST00000196916 622 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Igkv8-28A0A0G2JE47 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Igkv8-28A0A0G2JE47 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms