Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv13-1A0A0B4J1P8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm10566-201ENSMUST00000086739 996 ntBASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm7284-201ENSMUST00000131667 944 ntBASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv13-1A0A0B4J1P8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms