Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm8825-201ENSMUST00000182565 998 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv5-43A0A0B4J1J2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.46■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms