Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 BC037039-201ENSMUST00000192003 2205 ntBASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm10033-202ENSMUST00000211874 928 ntBASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm18671-201ENSMUST00000214826 683 ntBASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms