Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-23A0A0A6YVW3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm38027-201ENSMUST00000192315 235 ntBASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.08□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm22240-201ENSMUST00000175225 82 ntBASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm12085-201ENSMUST00000119263 940 ntBASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Timm23-208ENSMUST00000226683 750 ntBASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms