Protein–RNA interactions for Protein: A0A087WP35

Gm28919, Predicted gene 28919, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28919A0A087WP35 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28919A0A087WP35 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28919A0A087WP35 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28919A0A087WP35 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.33■□□□□ 0.36
Gm28919A0A087WP35 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Mir1199-201ENSMUST00000117015 119 ntBASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28919A0A087WP35 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28919A0A087WP35 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Gm28919A0A087WP35 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms