Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Gm4968-201ENSMUST00000071458 858 ntBASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-5A0A075B6B5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Trav6-5A0A075B6B5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-5A0A075B6B5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-5A0A075B6B5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-5A0A075B6B5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gm10517-202ENSMUST00000192970 758 ntBASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gm18025-201ENSMUST00000221733 862 ntBASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms