Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-4A0A075B6B4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Gm6345-202ENSMUST00000180900 204 ntBASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.49□□□□□ -0.41
Trav6-4A0A075B6B4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6-4A0A075B6B4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Gm36967-201ENSMUST00000193814 266 ntBASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Gm44430-201ENSMUST00000203376 995 ntBASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6-4A0A075B6B4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms