Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6d-7A0A075B6B0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6d-7A0A075B6B0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm9731-201ENSMUST00000209480 747 ntBASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.55□□□□□ -0.4
Trav6d-7A0A075B6B0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm6659-201ENSMUST00000174752 547 ntBASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm22697-201ENSMUST00000175194 63 ntBASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Gm7791-201ENSMUST00000219066 539 ntBASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6d-7A0A075B6B0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms