Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-4A0A075B654 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav3-4A0A075B654 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-4A0A075B654 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 AC108858.1-201ENSMUST00000228461 1498 ntBASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Gm13534-201ENSMUST00000121169 513 ntBASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms