Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm5643-201ENSMUST00000117081 966 ntBASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm7791-201ENSMUST00000219066 539 ntBASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 App-207ENSMUST00000227737 2827 ntBASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms