Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8n-2A0A075B633 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav8n-2A0A075B633 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8n-2A0A075B633 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Mir6404-201ENSMUST00000183699 94 ntBASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8n-2A0A075B633 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Gm11764-201ENSMUST00000120221 623 ntBASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8n-2A0A075B633 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms