Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav4n-4A0A075B615 Phf7-203ENSMUST00000226565 1971 ntBASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4n-4A0A075B615 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav4n-4A0A075B615 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav4n-4A0A075B615 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4n-4A0A075B615 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4n-4A0A075B615 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 App-207ENSMUST00000227737 2827 ntBASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4n-4A0A075B615 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Gm2399-201ENSMUST00000104944 225 ntBASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav4n-4A0A075B615 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms