Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Gm24841-201ENSMUST00000158676 357 ntBASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Gm37856-201ENSMUST00000191634 999 ntBASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-6A0A075B603 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-6A0A075B603 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trav6-6A0A075B603 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Gm5643-201ENSMUST00000117081 966 ntBASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms