Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.55□□□□□ -2
SMC3Q9UQE7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.55□□□□□ -2
SMC3Q9UQE7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMC3Q9UQE7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.55□□□□□ -2
SMC3Q9UQE7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.55□□□□□ -2
SMC3Q9UQE7 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 ROCK1P1-201ENST00000573767 549 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC025034.2-201ENST00000623264 286 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC007494.3-201ENST00000624660 743 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AL136313.1-201ENST00000624804 202 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC019226.2-201ENST00000625973 424 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 AC093591.3-201ENST00000634516 308 ntBASIC2.55□□□□□ -2
SMC3Q9UQE7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
SMC3Q9UQE7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SMC3Q9UQE7 AC004520.1-201ENST00000608362 1413 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 U8.14-201ENST00000390843 143 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.54□□□□□ -2
SMC3Q9UQE7 SKA2P1-201ENST00000425592 390 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 ELOCP14-201ENST00000428070 331 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.54□□□□□ -2
SMC3Q9UQE7 AC244035.1-201ENST00000430042 390 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 ELOCP7-201ENST00000439968 331 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC005094.1-201ENST00000440420 368 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.54□□□□□ -2
SMC3Q9UQE7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.54□□□□□ -2
SMC3Q9UQE7 RPS3AP22-201ENST00000488297 769 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 MRPS33P3-201ENST00000513456 322 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC116347.2-201ENST00000514912 523 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 RNA5SP200-201ENST00000516360 103 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 RNA5SP290-201ENST00000517133 127 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC060788.1-201ENST00000521318 469 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.54□□□□□ -2
SMC3Q9UQE7 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 MIR5002-201ENST00000584713 97 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC078899.2-201ENST00000595282 212 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC105129.3-201ENST00000605455 485 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC018638.7-201ENST00000605836 1114 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC007998.5-201ENST00000622938 237 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 AC243829.7-201ENST00000633081 225 ntBASIC2.54□□□□□ -2
SMC3Q9UQE7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SMC3Q9UQE7 RNU6-778P-201ENST00000363269 103 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AL445529.1-201ENST00000398713 389 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 BTF3L4P3-201ENST00000418879 476 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC236972.1-201ENST00000433225 199 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC108059.3-201ENST00000456388 214 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 RNA5SP233-201ENST00000459153 113 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 RPL23AP49-201ENST00000492925 468 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.53□□□□□ -2
SMC3Q9UQE7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.53□□□□□ -2
SMC3Q9UQE7 RNU6-64P-201ENST00000517119 105 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
SMC3Q9UQE7 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 DEFB108A-201ENST00000530110 222 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AC025165.5-201ENST00000602802 578 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 WISP1-OT1-201ENST00000602893 642 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 DPPA3P3-201ENST00000603842 430 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AC007938.3-201ENST00000604965 623 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AC004805.2-201ENST00000605382 482 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.53□□□□□ -2
SMC3Q9UQE7 AL355472.4-201ENST00000610233 626 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 AL161423.1-201ENST00000613700 262 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 MIR6132-201ENST00000622083 109 ntBASIC2.53□□□□□ -2
SMC3Q9UQE7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
SMC3Q9UQE7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 RNU5A-8P-201ENST00000364102 114 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 Y_RNA.245-201ENST00000364493 95 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 MIR17-201ENST00000385012 84 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 SNORA48.3-201ENST00000391081 134 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AF228730.1-201ENST00000397972 663 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL359634.1-202ENST00000404721 284 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL356379.1-201ENST00000414105 126 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 EIF4EP4-201ENST00000424916 578 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL118520.1-201ENST00000450770 291 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 KATNBL1P6-201ENST00000453433 915 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AC022493.1-201ENST00000492984 337 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 SNORA31.6-201ENST00000516241 130 ntBASIC2.52□□□□□ -2.01
SMC3Q9UQE7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMC3Q9UQE7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms