Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC021646.1-201ENST00000605469 484 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 RNU6-85P-201ENST00000605989 107 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 FAM157A-202ENST00000615155 405 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 MIR6134-201ENST00000617606 109 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AL731566.2-201ENST00000618971 317 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 AC068724.3-201ENST00000625906 87 ntBASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LIN7CQ9NUP9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 PWAR6-201ENST00000552334 4618 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-845P-201ENST00000362578 103 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-37P-201ENST00000362692 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-11P-201ENST00000364234 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-7-201ENST00000364784 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-867P-201ENST00000364956 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU1-64P-201ENST00000365443 163 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-8-201ENST00000365467 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-25P-201ENST00000383873 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-1-201ENST00000383898 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-48P-201ENST00000384161 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-36P-201ENST00000384172 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-4P-201ENST00000384205 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-5P-201ENST00000384238 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-72P-201ENST00000384285 79 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-3P-201ENST00000384314 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-16P-201ENST00000384385 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-15P-201ENST00000384534 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-2-201ENST00000384627 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-29P-201ENST00000384637 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-9-201ENST00000384776 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-33P-201ENST00000384793 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 MIR199A2-201ENST00000385289 110 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 Z98941.1-201ENST00000407764 100 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 MTCO3P46-201ENST00000425787 232 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL159987.2-201ENST00000432754 307 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC084198.1-201ENST00000477747 402 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RPL7P43-201ENST00000478876 753 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC091951.2-201ENST00000500762 203 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC046134.1-201ENST00000514454 666 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-507P-201ENST00000516045 100 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-581P-201ENST00000516214 105 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNA5SP179-201ENST00000517284 121 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC087854.1-201ENST00000519706 414 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC026464.5-201ENST00000562497 722 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AC120057.2-201ENST00000571520 271 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 MIR3942-201ENST00000585264 109 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNU6-6P-201ENST00000606623 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL355073.2-201ENST00000612106 557 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 MIR6500-201ENST00000622700 86 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 AL008636.1-201ENST00000625038 1018 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 RNA5SP196-201ENST00000625967 102 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 MIR3199-2-201ENST00000636243 86 ntBASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LIN7CQ9NUP9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.15□□□□□ -1.9
LIN7CQ9NUP9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LIN7CQ9NUP9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LIN7CQ9NUP9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNA5SP97-201ENST00000365006 84 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RAP1BP3-201ENST00000407180 549 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 U3.37-201ENST00000408528 213 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 RNU2-49P-201ENST00000410666 184 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 MTND3P8-201ENST00000412909 339 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 AL365496.1-201ENST00000426885 215 ntBASIC3.15□□□□□ -1.91
LIN7CQ9NUP9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms