Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 Y_RNA.364-201ENST00000365532 101 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNY1P14-201ENST00000384426 108 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNU6-331P-201ENST00000384724 107 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 MIR578-201ENST00000384828 96 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 USP9YP30-201ENST00000430729 455 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RPL12P25-201ENST00000455592 494 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNU6-470P-201ENST00000515954 104 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNA5SP143-201ENST00000516936 115 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 RNU6-699P-201ENST00000517081 110 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 CYCSP30-201ENST00000546447 172 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC087588.2-201ENST00000617667 426 ntBASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NDC1Q9BTX1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RNU6-490P-201ENST00000362985 107 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 Y_RNA.496-201ENST00000384444 101 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 Y_RNA.527-201ENST00000384573 102 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 MIR200C-201ENST00000384980 68 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 MIR548F4-201ENST00000408515 105 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AL360271.2-201ENST00000447710 161 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RNU7-138P-201ENST00000459479 64 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 MTATP8P1-201ENST00000467115 207 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AP000926.1-201ENST00000479573 241 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AL160314.1-201ENST00000490836 438 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 SUMO2P6-201ENST00000505273 288 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 MTND3P25-201ENST00000509243 135 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RNU6-120P-201ENST00000516077 103 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RNU6-764P-201ENST00000516396 105 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 SCARNA16.2-201ENST00000516520 172 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 RNA5SP384-201ENST00000516615 116 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AC011494.1-201ENST00000596454 237 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 AL161798.1-201ENST00000604630 131 ntBASIC3.74□□□□□ -1.81
NDC1Q9BTX1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NDC1Q9BTX1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC018529.3-201ENST00000624212 2254 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 RNU6-1059P-201ENST00000363752 98 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 MIR607-201ENST00000385241 96 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 SNORA57.3-201ENST00000411095 141 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 USMG5P1-201ENST00000425964 177 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL590383.1-201ENST00000428602 75 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 MTCYBP9-201ENST00000431021 303 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL445584.1-201ENST00000431451 330 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 RANP8-201ENST00000444720 713 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 NDUFS5P3-201ENST00000450668 321 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 GSTA11P-201ENST00000452866 669 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 RNU7-187P-201ENST00000458985 68 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AP000873.1-201ENST00000463987 400 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 RPL7P5-201ENST00000471472 736 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC069499.1-201ENST00000489433 509 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AC069113.1-201ENST00000517763 267 ntBASIC3.73□□□□□ -1.81
NDC1Q9BTX1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.73□□□□□ -1.81
NDC1Q9BTX1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms