Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL161798.1-201ENST00000604630 131 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AC093913.1-201ENST00000614178 329 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 AL133216.2-202ENST00000634512 349 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 Z99571.1-201ENST00000636677 394 ntBASIC3.52□□□□□ -1.85
VPS50Q96JG6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS50Q96JG6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 MTND4P29-201ENST00000503122 1372 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS50Q96JG6 RNU6-1252P-201ENST00000363054 104 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS50Q96JG6 MIR493-201ENST00000385254 89 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RNA5SP219-201ENST00000390940 113 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RNA5SP171-201ENST00000391071 115 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 POLHP1-201ENST00000411806 470 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RPS29P4-201ENST00000414733 161 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 SNRPEP4-201ENST00000435815 279 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RNU6-329P-201ENST00000459618 107 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 HMGN2P13-201ENST00000476476 274 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 Y_RNA.654-201ENST00000497848 106 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC103851.1-201ENST00000506833 274 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC087241.2-201ENST00000535801 324 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 ATP1B3P1-201ENST00000605365 821 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 Z82243.1-201ENST00000609432 473 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 AL359697.1-201ENST00000624879 587 ntBASIC3.51□□□□□ -1.85
VPS50Q96JG6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VPS50Q96JG6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS50Q96JG6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS50Q96JG6 RNA5SP119-201ENST00000362715 117 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 Y_RNA.166-201ENST00000363730 102 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 Y_RNA.184-201ENST00000363884 108 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 RNU6-371P-201ENST00000364283 108 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 RNA5SP72-201ENST00000364442 117 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AP002088.1-201ENST00000382740 395 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 RNU6-393P-201ENST00000384475 107 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 MIR218-2-201ENST00000385006 110 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 RPS4XP7-201ENST00000406274 780 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 U3.42-201ENST00000408746 214 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 MTND3P8-201ENST00000412909 339 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 AC080125.1-201ENST00000414888 684 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 AC006946.1-201ENST00000429106 328 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AL158071.1-201ENST00000430315 461 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 MTND4LP16-201ENST00000440828 295 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 DYNLL1P5-201ENST00000467158 270 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 MTND3P22-201ENST00000510932 243 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 RNU2-69P-201ENST00000516061 100 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AC022690.1-201ENST00000526681 550 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 VN1R80P-201ENST00000597126 338 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 MTND1P37-201ENST00000636562 264 ntBASIC3.5□□□□□ -1.85
VPS50Q96JG6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS50Q96JG6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS50Q96JG6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS50Q96JG6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS50Q96JG6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS50Q96JG6 Y_RNA.100-201ENST00000363141 102 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RNU4-73P-201ENST00000363164 141 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RNU6-1303P-201ENST00000364841 107 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 MIR578-201ENST00000384828 96 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RNU6-510P-201ENST00000391239 108 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RN7SKP32-201ENST00000410167 303 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 UBE2D3P2-201ENST00000424409 445 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC006989.1-201ENST00000427212 131 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 YME1L1P1-201ENST00000429435 297 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 BX679664.1-201ENST00000434429 253 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 NDUFB1P1-201ENST00000435191 180 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 PIGFP3-201ENST00000441918 722 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RPL21P41-201ENST00000459863 264 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 RPS20P22-201ENST00000473700 357 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 KC877373.1-201ENST00000479066 408 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RPL32P34-201ENST00000486380 400 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms