Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC011155.2-201ENST00000623202 216 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 AL159972.1-201ENST00000625150 448 ntBASIC3.94□□□□□ -1.78
CHFRQ96EP1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHFRQ96EP1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHFRQ96EP1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.94□□□□□ -1.78
CHFRQ96EP1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNA5SP295-201ENST00000362655 121 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNU6-82P-201ENST00000363970 107 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHFRQ96EP1 SNORA51.6-201ENST00000384151 125 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 Y_RNA.461-201ENST00000384263 103 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 Y_RNA.483-201ENST00000384380 101 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 Y_RNA.555-201ENST00000384673 110 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 SNORA3C-201ENST00000408792 125 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNU6-101P-201ENST00000410323 104 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNU2-38P-201ENST00000410856 79 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 RPS15AP10-201ENST00000432472 382 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 VDAC1P3-201ENST00000434069 851 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 OSTCP8-201ENST00000445117 448 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC004801.2-202ENST00000463559 283 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 PLGLA-201ENST00000465668 449 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 RPL23AP55-201ENST00000498163 452 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC016065.2-201ENST00000514530 444 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RNU4-77P-201ENST00000516692 156 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC022080.3-201ENST00000544433 482 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 OR11H5P-201ENST00000554039 926 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC068790.3-201ENST00000602988 553 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC010378.1-201ENST00000619270 362 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 AC091953.5-201ENST00000622919 233 ntBASIC3.93□□□□□ -1.78
CHFRQ96EP1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CHFRQ96EP1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CHFRQ96EP1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHFRQ96EP1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHFRQ96EP1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHFRQ96EP1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 RNU6-432P-201ENST00000384196 109 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 Y_RNA.477-201ENST00000384352 108 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 RNU6-837P-201ENST00000391056 108 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 EIF4E2P1-201ENST00000393781 255 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL445529.1-201ENST00000398713 389 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL391417.1-201ENST00000404100 426 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 Y_RNA.594-201ENST00000410373 140 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 RNU6-1050P-201ENST00000410388 107 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 HSPD1P21-201ENST00000436541 245 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 YWHAZP8-201ENST00000436935 731 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL049830.2-201ENST00000480072 201 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 RN7SL293P-201ENST00000481765 281 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AC116337.1-201ENST00000509680 687 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 TXNP6-201ENST00000510190 310 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AC005798.1-201ENST00000513715 387 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 SNORD116.3-201ENST00000517176 78 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL137161.1-201ENST00000532231 390 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 AP001486.3-201ENST00000615334 372 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 MIR6128-201ENST00000615528 109 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AF117829.1-206ENST00000621883 3802 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AC091903.1-201ENST00000624322 454 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 AL512643.1-201ENST00000635735 524 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 AC018555.1-201ENST00000567548 1980 ntBASIC3.92□□□□□ -1.78
CHFRQ96EP1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHFRQ96EP1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHFRQ96EP1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHFRQ96EP1 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.180-201ENST00000363867 113 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 RNU6-200P-201ENST00000364743 107 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.515-201ENST00000384535 112 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 Y_RNA.562-201ENST00000384695 113 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 MT-TC-201ENST00000387405 66 ntBASIC3.91□□□□□ -1.78
CHFRQ96EP1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms