Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 U8.3-201ENST00000363321 132 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 U3.4-201ENST00000363352 213 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 SNORA4.3-201ENST00000365564 137 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 SET-203ENST00000372688 801 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 RNU2-25P-201ENST00000411041 191 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 RPL36AP6-201ENST00000435770 321 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC073614.1-201ENST00000438690 650 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 MTATP6P26-201ENST00000445926 662 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 BTF3P15-201ENST00000455606 336 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 RN7SL20P-201ENST00000488827 297 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 SNORA31.19-201ENST00000517079 126 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 RN7SKP40-201ENST00000517211 242 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 OR5B19P-201ENST00000531766 928 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 MIR1273C-201ENST00000578669 77 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 NRBF2P1-201ENST00000587407 859 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC005261.5-201ENST00000596280 355 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AL139286.2-201ENST00000606838 396 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 AC024940.5-201ENST00000622889 474 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 FARSBP1-201ENST00000435808 1778 ntBASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SNRNP40Q96DI7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 Y_RNA.201-201ENST00000364052 96 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 RNU6-461P-201ENST00000364195 107 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 RNU6-395P-201ENST00000365662 106 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 Y_RNA.534-201ENST00000384599 112 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 RNU6-195P-201ENST00000411352 109 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 RNA5SP111-201ENST00000411386 101 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL592148.1-201ENST00000413568 445 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 BX682237.1-201ENST00000415016 335 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC114491.1-201ENST00000416095 246 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 PTGES3P4-201ENST00000426243 356 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL078601.1-201ENST00000444542 271 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 MTND1P27-201ENST00000451117 902 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC092001.1-201ENST00000453012 261 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 TRBV12-1-201ENST00000479785 344 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC091965.2-201ENST00000512324 613 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC091544.4-201ENST00000555268 342 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 LINC00933-203ENST00000559812 219 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AL391813.1-201ENST00000603098 260 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC135507.1-201ENST00000607214 561 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 AC073476.4-201ENST00000628409 72 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 ASNSP3-201ENST00000451989 1306 ntBASIC2.62□□□□□ -1.99
SNRNP40Q96DI7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 RNU6-179P-201ENST00000363350 107 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AL360182.1-201ENST00000397433 468 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC098826.1-201ENST00000433943 471 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 RPS12P18-201ENST00000442381 270 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC003071.1-201ENST00000451219 789 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 RNU6-581P-201ENST00000516214 105 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 SNORA18.6-201ENST00000516792 115 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 RNA5SP380-201ENST00000517190 98 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC245166.1-201ENST00000521012 253 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 MIR98-201ENST00000606724 119 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 AC012409.4-201ENST00000612923 249 ntBASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNRNP40Q96DI7 ELL2P3-201ENST00000457883 1602 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms