Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 MIR4703-201ENST00000577728 79 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 MTND4LP5-201ENST00000605152 292 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 U6atac.1-201ENST00000616025 117 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC073308.1-201ENST00000623696 305 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC110079.1-202ENST00000635213 138 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 AC006020.1-201ENST00000420179 1854 ntBASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3KBP1Q96B97 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL359693.1-201ENST00000614959 2407 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 DYNLT3P1-201ENST00000378574 347 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.450-201ENST00000384198 113 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.453-201ENST00000384223 109 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RNU6-550P-201ENST00000391057 101 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 OR6C66P-201ENST00000414917 930 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 EIF1P1-201ENST00000421436 341 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL160275.3-201ENST00000423876 471 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 CALM2P2-201ENST00000428512 440 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC005326.1-201ENST00000429197 123 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL596276.1-201ENST00000434465 418 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC006028.1-201ENST00000438379 402 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL356010.1-201ENST00000456364 102 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL163973.1-201ENST00000484753 577 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RPL36AP51-201ENST00000487216 318 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RAC1P5-201ENST00000512182 576 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC105417.1-201ENST00000514691 285 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 RN7SKP219-201ENST00000516825 296 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC068135.2-201ENST00000569293 1028 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC010653.1-201ENST00000571108 881 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 MIR4276-201ENST00000584832 70 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC006504.3-201ENST00000586818 523 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC008945.2-201ENST00000606056 604 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC010338.1-201ENST00000621823 717 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC024940.5-201ENST00000622889 474 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
SH3KBP1Q96B97 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.38-201ENST00000362617 102 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-552P-201ENST00000362869 119 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-884P-201ENST00000363889 107 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.255-201ENST00000364581 97 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.402-201ENST00000383972 102 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 Y_RNA.534-201ENST00000384599 112 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-903P-201ENST00000391270 109 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU2-68P-201ENST00000410878 191 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-55P-201ENST00000411092 107 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 RNU6-954P-201ENST00000411355 107 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC063979.1-201ENST00000415539 377 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 GTF2IP20-201ENST00000431663 360 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AL139415.2-201ENST00000431968 163 ntBASIC3.3□□□□□ -1.88
SH3KBP1Q96B97 AC000111.3-201ENST00000433478 193 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms