Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-581P-201ENST00000516214 105 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RN7SKP272-201ENST00000516988 232 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RNU6-685P-201ENST00000517088 95 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 RANP3-201ENST00000530970 276 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC008521.1-201ENST00000587471 187 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AL020997.2-201ENST00000602607 184 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AC087045.1-201ENST00000605856 382 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 AP001486.3-201ENST00000615334 372 ntBASIC2.78□□□□□ -1.96
VPS33AQ96AX1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS33AQ96AX1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 RNU6-898P-201ENST00000365627 104 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 SNORA75B-201ENST00000384053 137 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AL139095.1-201ENST00000404326 391 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 PIGFP2-201ENST00000421400 651 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 KATNBL1P3-201ENST00000443475 909 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC022493.1-201ENST00000492984 337 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 MTCO3P28-201ENST00000513351 515 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 Y_RNA.688-201ENST00000516565 95 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AL645944.1-201ENST00000603857 493 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC093648.1-201ENST00000623546 606 ntBASIC2.77□□□□□ -1.97
VPS33AQ96AX1 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 MTND4P27-201ENST00000450813 1354 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL109809.4-201ENST00000603520 2185 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 Y_RNA.77-201ENST00000362962 107 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 Y_RNA.367-201ENST00000365544 101 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 MIR449B-201ENST00000384995 97 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL031779.1-201ENST00000415663 330 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC133104.1-201ENST00000429100 218 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL583843.1-201ENST00000456070 346 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 SNORA84-201ENST00000459229 133 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 RN7SL504P-201ENST00000494496 287 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 ARL2BPP4-201ENST00000506854 471 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 ACA59.2-201ENST00000517061 156 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC109329.2-201ENST00000519658 482 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC040904.1-201ENST00000590850 223 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC008121.1-201ENST00000603244 268 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL138889.2-201ENST00000603883 242 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC010678.1-201ENST00000614118 713 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AL449363.1-201ENST00000617815 186 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC072046.2-201ENST00000618366 268 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 U6.42-201ENST00000618440 107 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 AC091953.5-201ENST00000622919 233 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.76□□□□□ -1.97
VPS33AQ96AX1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS33AQ96AX1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 RNU1-100P-201ENST00000365255 165 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AL365338.1-201ENST00000422282 858 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AL627311.1-201ENST00000431514 115 ntBASIC2.75□□□□□ -1.97
VPS33AQ96AX1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms