Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RPS15AP5-201ENST00000436276 388 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 GTF2IP12-201ENST00000456547 356 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC103833.1-201ENST00000517442 172 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 HAUS1P3-201ENST00000523909 662 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AP001486.3-201ENST00000615334 372 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNU6-115P-201ENST00000364310 107 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RN7SKP200-201ENST00000410564 320 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 USP9YP19-201ENST00000412165 485 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 USP9YP13-201ENST00000417797 480 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL109913.1-201ENST00000421173 514 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 FAM204CP-201ENST00000424489 642 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 UBE2V2P3-201ENST00000433562 437 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MTND6P13-201ENST00000443510 523 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SNRPGP6-201ENST00000451124 220 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MRPS36P2-201ENST00000512569 299 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 CYCSP2-201ENST00000558168 301 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC027104.1-201ENST00000563702 681 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL158032.1-201ENST00000605401 106 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL589743.7-201ENST00000612637 233 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 LINC02211-204ENST00000642024 1070 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MT-TC-201ENST00000387405 66 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SNORD65C-201ENST00000390962 71 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNU2-70P-201ENST00000410718 179 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RPL26P27-201ENST00000414397 437 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC099548.1-201ENST00000421443 426 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 PNPLA4P1-201ENST00000458328 305 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 OR52A4P-202ENST00000481634 799 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC114981.1-201ENST00000503897 678 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC093801.2-201ENST00000503966 1050 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC004217.3-201ENST00000551552 878 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MIR5571-201ENST00000577998 113 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MIR4666A-201ENST00000580160 79 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 MTCYBP22-201ENST00000603788 447 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC112503.2-201ENST00000609005 552 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC090132.2-201ENST00000615881 347 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 U4atac.1-201ENST00000618345 95 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SNRPEP3-201ENST00000338402 276 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL590623.1-201ENST00000427864 105 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL353689.1-201ENST00000438895 199 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 HSPE1P24-201ENST00000450782 238 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 SNRPFP3-201ENST00000457792 225 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RPL30P12-201ENST00000474666 353 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AL049874.1-201ENST00000489560 388 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.38□□□□□ -2.35
SYNE1Q8NF91 IMMP1LP2-201ENST00000552954 492 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 GAS5-AS1-201ENST00000602767 694 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 AC013553.2-201ENST00000604244 589 ntBASIC0.38□□□□□ -2.35
SYNE1Q8NF91 RNU6-251P-201ENST00000363235 104 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RPL22P22-201ENST00000395439 379 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU2-28P-201ENST00000410457 189 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 MTND4P20-201ENST00000424125 869 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC016691.1-201ENST00000441321 413 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 SUMO1P1-201ENST00000497904 306 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 OR5AK1P-201ENST00000524837 922 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC103710.4-201ENST00000609301 899 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC008498.1-201ENST00000613012 531 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC006338.1-201ENST00000618453 749 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL512506.2-201ENST00000624472 458 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL391516.1-201ENST00000554380 2449 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 ZNF29P-201ENST00000225587 168 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU6-28P-201ENST00000362378 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 RNU6-19P-201ENST00000384718 107 ntBASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.37□□□□□ -2.35
SYNE1Q8NF91 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms