Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 MIR3167-201ENST00000579623 85 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC060766.3-201ENST00000591442 263 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC119751.7-201ENST00000600494 245 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 BNIP3P9-201ENST00000603714 553 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC087752.4-201ENST00000605911 462 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 AC068880.5-201ENST00000624331 290 ntBASIC2.34□□□□□ -2.03
C9orf40Q8IXQ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
C9orf40Q8IXQ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 MAPK10-266ENST00000641066 6555 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 Z82195.2-201ENST00000612348 18351 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SNORD116-9-201ENST00000384000 95 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SNORD116-3-201ENST00000384287 95 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SNORD116-7-201ENST00000384404 95 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SNORD116-5-201ENST00000384462 95 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 MIR558-201ENST00000384920 94 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 HMGN2P30-201ENST00000423237 256 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL592045.1-201ENST00000429867 352 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC236972.1-201ENST00000433225 199 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL591212.2-201ENST00000433923 257 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC073614.1-201ENST00000438690 650 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 RPL23AP58-201ENST00000440453 469 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC244505.5-201ENST00000443639 207 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 Z83846.1-201ENST00000446798 265 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC093899.1-201ENST00000457984 376 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SUMO2P6-201ENST00000505273 288 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC114786.4-201ENST00000508771 728 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-143P-201ENST00000516942 93 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-1220P-201ENST00000517126 108 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AP000873.5-201ENST00000533906 236 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC174048.1-201ENST00000603389 144 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC064872.1-201ENST00000604823 1072 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC135507.1-201ENST00000607214 561 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AL161734.1-201ENST00000609720 557 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AP003399.1-201ENST00000637534 361 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 AC008669.1-201ENST00000565823 2178 ntBASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
C9orf40Q8IXQ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RNU1-105P-201ENST00000363470 161 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RNU1-109P-201ENST00000383960 147 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-190P-201ENST00000384154 102 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 MIR767-201ENST00000390228 109 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RNA5SP354-201ENST00000391247 136 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 C1DP2-201ENST00000418167 426 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 MED13P1-201ENST00000428342 171 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 MTCO2P16-201ENST00000436962 677 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC073901.1-201ENST00000462471 408 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RPL36AP51-201ENST00000487216 318 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 RPS27P26-201ENST00000494583 239 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 TBCAP3-201ENST00000512475 312 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC114781.4-201ENST00000513707 639 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC087883.1-201ENST00000551882 391 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AL359212.1-201ENST00000556608 614 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC027176.1-201ENST00000560204 514 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 MIR5092-201ENST00000583139 88 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC022893.3-201ENST00000607665 437 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 DUSP12P1-201ENST00000612874 516 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC008498.1-201ENST00000613012 531 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC130324.3-201ENST00000614165 542 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 AC243829.7-201ENST00000633081 225 ntBASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
C9orf40Q8IXQ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
C9orf40Q8IXQ3 RNU6-778P-201ENST00000363269 103 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms