Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC245517.5-201ENST00000611529 162 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3□□□□□ -1.93
NPHP3Q7Z494 AL136313.1-201ENST00000624804 202 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 AC007785.2-201ENST00000598627 1916 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP3Q7Z494 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
NPHP3Q7Z494 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3□□□□□ -1.93
NPHP3Q7Z494 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPHP3Q7Z494 AL049641.1-201ENST00000441055 1948 ntBASIC3□□□□□ -1.93
NPHP3Q7Z494 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 SNORD116-9-201ENST00000384000 95 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 SNORD116-3-201ENST00000384287 95 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 SNORD116-7-201ENST00000384404 95 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 SNORD116-5-201ENST00000384462 95 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 RNU6-1035P-201ENST00000384477 107 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 Y_RNA.608-201ENST00000410647 95 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AL445646.1-201ENST00000431784 216 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 ARPC3P1-201ENST00000437218 533 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC009961.3-201ENST00000449832 765 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC092798.1-201ENST00000458542 409 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 RPS20P20-201ENST00000460498 340 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 MTND4LP3-201ENST00000468320 276 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 ARL4AP2-201ENST00000507378 601 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC107934.1-201ENST00000522215 217 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 PIGPP4-201ENST00000584447 307 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC119751.7-201ENST00000600494 245 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC112191.3-201ENST00000604371 277 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC131902.3-201ENST00000611767 581 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC093838.1-201ENST00000613014 469 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 TUG1_2.1-201ENST00000614234 87 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AL158063.1-201ENST00000615349 536 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
NPHP3Q7Z494 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
NPHP3Q7Z494 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 SNORD115.1-201ENST00000391109 76 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 RN7SKP142-201ENST00000411236 328 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AL353777.1-201ENST00000425552 326 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 RPL35AP22-201ENST00000436855 335 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 MTCO2P16-201ENST00000436962 677 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 DDX3P2-201ENST00000446138 111 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 RPS26P21-201ENST00000475397 348 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 Y_RNA.695-201ENST00000516715 107 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 RNU6-1282P-201ENST00000516735 96 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC022878.1-201ENST00000530684 149 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AP003122.4-201ENST00000530980 758 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC068135.2-201ENST00000569293 1028 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 MIR3118-1-201ENST00000581787 76 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC135507.1-201ENST00000607214 561 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC004908.2-201ENST00000609090 574 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC138749.5-201ENST00000611461 208 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC093783.1-201ENST00000612976 329 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC116165.2-201ENST00000616705 206 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC092140.2-201ENST00000618027 521 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC009831.4-201ENST00000620744 325 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC009878.1-201ENST00000621819 340 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 AC110079.1-202ENST00000635213 138 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.98□□□□□ -1.93
NPHP3Q7Z494 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.98□□□□□ -1.93
NPHP3Q7Z494 RNY4P16-201ENST00000364768 94 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC007919.1-201ENST00000429380 217 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 TIMM9P1-201ENST00000436122 256 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 MTND4P32-201ENST00000437189 1237 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 CBWD4P-201ENST00000445695 655 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AL122001.1-201ENST00000457027 370 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 AC233702.1-201ENST00000482905 502 ntBASIC2.97□□□□□ -1.93
NPHP3Q7Z494 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms